Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.78□□□□□ -1
PTPREP23469 AC122714.1-201ENST00000502510 459 ntBASIC8.78□□□□□ -1
PTPREP23469 RN7SKP31-201ENST00000516354 278 ntBASIC8.78□□□□□ -1
PTPREP23469 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC8.78□□□□□ -1
PTPREP23469 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.78□□□□□ -1
PTPREP23469 AC022878.1-201ENST00000530684 149 ntBASIC8.78□□□□□ -1
PTPREP23469 OR7E96P-201ENST00000530816 976 ntBASIC8.78□□□□□ -1
PTPREP23469 NELL2-211ENST00000548826 559 ntTSL 2 BASIC8.78□□□□□ -1
PTPREP23469 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC8.78□□□□□ -1
PTPREP23469 AC023813.3-201ENST00000561876 539 ntTSL 3 BASIC8.78□□□□□ -1
PTPREP23469 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 AC006270.2-201ENST00000578523 652 ntBASIC8.78□□□□□ -1
PTPREP23469 RN7SL14P-201ENST00000579715 298 ntBASIC8.78□□□□□ -1
PTPREP23469 MIR378H-201ENST00000579966 83 ntBASIC8.78□□□□□ -1
PTPREP23469 AC012065.3-201ENST00000602736 439 ntBASIC8.78□□□□□ -1
PTPREP23469 AP001554.1-201ENST00000604533 376 ntBASIC8.78□□□□□ -1
PTPREP23469 AC006335.3-201ENST00000613408 292 ntBASIC8.78□□□□□ -1
PTPREP23469 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC8.78□□□□□ -1
PTPREP23469 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.78□□□□□ -1
PTPREP23469 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 HNRNPU-223ENST00000640001 4227 ntTSL 5 BASIC8.78□□□□□ -1
PTPREP23469 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.78□□□□□ -1
PTPREP23469 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PTPREP23469 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PTPREP23469 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
PTPREP23469 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
PTPREP23469 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC8.78□□□□□ -1
PTPREP23469 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
PTPREP23469 SOCS5P5-201ENST00000402732 1586 ntBASIC8.78□□□□□ -1
PTPREP23469 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC8.77□□□□□ -1
PTPREP23469 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
PTPREP23469 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1
PTPREP23469 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
PTPREP23469 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC8.77□□□□□ -1
PTPREP23469 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.77□□□□□ -1
PTPREP23469 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC8.77□□□□□ -1
PTPREP23469 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1
PTPREP23469 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 CEACAM6-201ENST00000199764 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 GTF2IP1-202ENST00000614592 2047 ntBASIC8.77□□□□□ -1.01
PTPREP23469 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC8.77□□□□□ -1.01
PTPREP23469 FARSBP1-201ENST00000435808 1778 ntBASIC8.77□□□□□ -1.01
PTPREP23469 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
PTPREP23469 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 RNA5SP260-201ENST00000363849 111 ntBASIC8.77□□□□□ -1.01
PTPREP23469 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 Y_RNA.445-201ENST00000384168 102 ntBASIC8.77□□□□□ -1.01
PTPREP23469 AC121334.1-201ENST00000396414 802 ntBASIC8.77□□□□□ -1.01
PTPREP23469 PEX12P1-201ENST00000400284 1048 ntBASIC8.77□□□□□ -1.01
PTPREP23469 HMGB3P18-201ENST00000406327 590 ntBASIC8.77□□□□□ -1.01
PTPREP23469 MIR1284-201ENST00000408337 120 ntBASIC8.77□□□□□ -1.01
PTPREP23469 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
PTPREP23469 RNU2-42P-201ENST00000410697 113 ntBASIC8.77□□□□□ -1.01
PTPREP23469 RN7SKP29-201ENST00000410957 272 ntBASIC8.77□□□□□ -1.01
PTPREP23469 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC8.77□□□□□ -1.01
PTPREP23469 AC023141.10-201ENST00000415634 200 ntBASIC8.77□□□□□ -1.01
PTPREP23469 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.77□□□□□ -1.01
PTPREP23469 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC8.77□□□□□ -1.01
PTPREP23469 RAB9AP5-201ENST00000437794 597 ntBASIC8.77□□□□□ -1.01
PTPREP23469 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC8.77□□□□□ -1.01
PTPREP23469 RAB9AP2-201ENST00000443911 597 ntBASIC8.77□□□□□ -1.01
PTPREP23469 AC097499.1-201ENST00000444277 208 ntBASIC8.77□□□□□ -1.01
PTPREP23469 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 AL139156.3-201ENST00000454802 394 ntBASIC8.77□□□□□ -1.01
PTPREP23469 SNORA35.1-201ENST00000458908 128 ntBASIC8.77□□□□□ -1.01
PTPREP23469 H3F3AP5-201ENST00000475267 429 ntBASIC8.77□□□□□ -1.01
PTPREP23469 AL928654.1-201ENST00000476081 354 ntBASIC8.77□□□□□ -1.01
PTPREP23469 AC027575.1-201ENST00000481064 460 ntBASIC8.77□□□□□ -1.01
PTPREP23469 GAPDHP39-201ENST00000481866 979 ntBASIC8.77□□□□□ -1.01
PTPREP23469 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC8.77□□□□□ -1.01
PTPREP23469 AF305872.1-201ENST00000485217 471 ntBASIC8.77□□□□□ -1.01
PTPREP23469 AC093325.1-201ENST00000508378 326 ntBASIC8.77□□□□□ -1.01
PTPREP23469 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC8.77□□□□□ -1.01
PTPREP23469 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC8.77□□□□□ -1.01
PTPREP23469 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.77□□□□□ -1.01
PTPREP23469 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8.77□□□□□ -1.01
PTPREP23469 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC8.77□□□□□ -1.01
PTPREP23469 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.01
PTPREP23469 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC8.77□□□□□ -1.01
PTPREP23469 SNX29P2-204ENST00000603801 875 ntBASIC8.77□□□□□ -1.01
PTPREP23469 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC8.77□□□□□ -1.01
PTPREP23469 MIR8082-201ENST00000612488 81 ntBASIC8.77□□□□□ -1.01
PTPREP23469 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
PTPREP23469 EEF1A1P16-201ENST00000325349 1414 ntBASIC8.77□□□□□ -1.01
PTPREP23469 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC8.77□□□□□ -1.01
PTPREP23469 IQCA1-204ENST00000409907 3281 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
PTPREP23469 AF131215.2-201ENST00000531549 1710 ntBASIC8.77□□□□□ -1.01
PTPREP23469 HSPD1P4-201ENST00000547203 1702 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms