Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 RNU4-25P-201ENST00000410569 230 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AL136455.1-201ENST00000441083 1240 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC063943.1-201ENST00000465434 453 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC006967.1-201ENST00000467608 589 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 MIR3939-201ENST00000582614 106 ntBASIC5.01□□□□□ -1.61
CHD8Q9HCK8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CHD8Q9HCK8 AC010329.1-201ENST00000593903 8328 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5□□□□□ -1.61
CHD8Q9HCK8 A2MP1-204ENST00000566278 4130 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CHD8Q9HCK8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5□□□□□ -1.61
CHD8Q9HCK8 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
CHD8Q9HCK8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHD8Q9HCK8 ST13P16-201ENST00000401760 781 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 RPSAP35-201ENST00000413753 818 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5□□□□□ -1.61
CHD8Q9HCK8 RPL23AP1-201ENST00000428990 471 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5□□□□□ -1.61
CHD8Q9HCK8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5□□□□□ -1.61
CHD8Q9HCK8 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5□□□□□ -1.61
CHD8Q9HCK8 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5□□□□□ -1.61
CHD8Q9HCK8 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5□□□□□ -1.61
CHD8Q9HCK8 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5□□□□□ -1.61
CHD8Q9HCK8 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5□□□□□ -1.61
CHD8Q9HCK8 CDC42EP3P1-201ENST00000601004 764 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 AL021368.3-201ENST00000607119 578 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHD8Q9HCK8 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5□□□□□ -1.61
CHD8Q9HCK8 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5□□□□□ -1.61
CHD8Q9HCK8 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5□□□□□ -1.61
CHD8Q9HCK8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5□□□□□ -1.61
CHD8Q9HCK8 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CHD8Q9HCK8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5□□□□□ -1.61
CHD8Q9HCK8 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5□□□□□ -1.61
CHD8Q9HCK8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5□□□□□ -1.61
CHD8Q9HCK8 AC074255.1-201ENST00000511259 501 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 AC139697.1-201ENST00000548429 745 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5□□□□□ -1.61
CHD8Q9HCK8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5□□□□□ -1.61
CHD8Q9HCK8 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5□□□□□ -1.61
CHD8Q9HCK8 AP003789.1-201ENST00000617737 605 ntBASIC5□□□□□ -1.61
CHD8Q9HCK8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CHD8Q9HCK8 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC5□□□□□ -1.61
CHD8Q9HCK8 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CHD8Q9HCK8 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CHD8Q9HCK8 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AC009831.5-201ENST00000624000 3189 ntBASIC4.99□□□□□ -1.61
CHD8Q9HCK8 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 SNORA9-201ENST00000384215 133 ntBASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AL049697.2-201ENST00000403708 294 ntBASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AOX3P-204ENST00000491025 2107 ntBASIC4.99□□□□□ -1.61
CHD8Q9HCK8 GAPDHP56-201ENST00000506031 988 ntBASIC4.99□□□□□ -1.61
CHD8Q9HCK8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AC106785.1-201ENST00000565935 262 ntBASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 AC005725.1-201ENST00000577346 2607 ntBASIC4.99□□□□□ -1.61
CHD8Q9HCK8 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.99□□□□□ -1.61
CHD8Q9HCK8 MTCO1P35-201ENST00000515270 228 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms