Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC091917.2-201ENST00000505002 744 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC114781.3-201ENST00000512083 142 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 BNIP3P1-201ENST00000547295 580 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 RBM22P12-201ENST00000567098 1255 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 LINC00556-201ENST00000569603 412 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC009597.2-201ENST00000604659 592 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC000374.1-201ENST00000434698 1745 ntBASIC6.47□□□□□ -1.37
UPF2Q9HAU5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC6.47□□□□□ -1.37
UPF2Q9HAU5 AC093849.1-201ENST00000563631 2209 ntBASIC6.46□□□□□ -1.37
UPF2Q9HAU5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
UPF2Q9HAU5 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
UPF2Q9HAU5 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
UPF2Q9HAU5 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.46□□□□□ -1.37
UPF2Q9HAU5 AP005432.1-201ENST00000580891 3485 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 RNU4-2-201ENST00000365668 141 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 HSPA8P15-201ENST00000401676 786 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 HMGB1P20-201ENST00000402555 677 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 EEF1B2P3-201ENST00000447718 678 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 RPS4XP12-201ENST00000461747 709 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC114786.1-201ENST00000512892 1415 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 RN7SKP99-201ENST00000517028 307 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC027369.2-201ENST00000528030 440 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC092121.1-201ENST00000569452 202 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AP001496.3-201ENST00000580230 913 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC011840.5-201ENST00000582125 771 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC011626.1-201ENST00000604710 562 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 BX005214.3-202ENST00000619809 325 ntBASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
UPF2Q9HAU5 AC025574.1-201ENST00000554784 1653 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AC068870.3-201ENST00000625077 2536 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 PCAT14-202ENST00000627127 3935 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 RN7SKP171-201ENST00000364417 303 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AC245060.4-201ENST00000413293 1121 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AL133173.1-201ENST00000423458 397 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AL354893.1-201ENST00000433735 348 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 RN7SL189P-201ENST00000468631 289 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 HMGB1P44-201ENST00000508597 572 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 RN7SL708P-201ENST00000580952 299 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AC244100.4-201ENST00000617747 388 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AC024884.1-201ENST00000620583 399 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.45□□□□□ -1.38
UPF2Q9HAU5 AC006210.2-201ENST00000367074 1545 ntBASIC6.45□□□□□ -1.38
UPF2Q9HAU5 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 MARK2P12-201ENST00000420129 585 ntBASIC6.44□□□□□ -1.38
UPF2Q9HAU5 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 GSTM5P1-201ENST00000434751 660 ntBASIC6.44□□□□□ -1.38
UPF2Q9HAU5 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
UPF2Q9HAU5 NOP56P2-201ENST00000447491 769 ntBASIC6.44□□□□□ -1.38
UPF2Q9HAU5 LDHBP2-201ENST00000456969 1005 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms