Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC093870.1-201ENST00000506837 213 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 UBE2CP1-201ENST00000557130 554 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC099676.1-201ENST00000608886 657 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AL592494.3-201ENST00000609485 464 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AC012254.5-201ENST00000623573 478 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 ZNRD1ASP-221ENST00000637794 1074 ntBASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC8.42□□□□□ -1.06
ZC3H4Q9UPT8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 TMCC3-203ENST00000551457 4361 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC010132.2-201ENST00000295493 1043 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC093719.1-202ENST00000392735 373 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 NUP35P2-201ENST00000416748 943 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 CHEK2P5-201ENST00000423877 246 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 VN1R20P-201ENST00000425215 966 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC108479.1-201ENST00000431142 427 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 DDX39BP2-208ENST00000453923 258 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AL035407.2-201ENST00000454090 378 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 RNA5SP269-201ENST00000459032 137 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC092989.1-201ENST00000481235 277 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 MTCO2P30-201ENST00000503662 364 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 ULK4P2-202ENST00000564187 492 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 IGKV2OR2-1-201ENST00000605129 304 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AP000238.1-201ENST00000608759 426 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC093635.1-201ENST00000609028 555 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC012150.2-201ENST00000621300 544 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC012414.7-202ENST00000622705 1090 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC114546.4-201ENST00000624413 369 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 SNX18P12-201ENST00000624821 759 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC104966.1-201ENST00000467010 1464 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC8.41□□□□□ -1.06
ZC3H4Q9UPT8 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms