Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 MIR4437-201ENST00000581331 60 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AP001429.1-201ENST00000602568 530 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC087283.1-201ENST00000604029 1074 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 5S_rRNA.20-201ENST00000612104 118 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 PTCHD3P1-201ENST00000612350 537 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC097641.3-201ENST00000613523 464 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 pRNA.9-201ENST00000618609 89 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AL160413.1-201ENST00000622780 310 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AC119674.1-212ENST00000641155 993 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 CASC19-260ENST00000641828 2001 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 AL645937.1-201ENST00000641739 1652 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 GDI2P1-201ENST00000429312 1336 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 C15orf41-202ENST00000437989 2240 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 CASC19-205ENST00000641013 1411 ntBASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
PCDHB11Q9Y5F2 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 SYNPR-204ENST00000460711 2383 ntTSL 2 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 MT-RNR2-201ENST00000387347 1559 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 CDH18-207ENST00000507958 3542 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 REG1CP-205ENST00000444841 1710 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 CD86-202ENST00000330540 2708 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 THAP12P7-201ENST00000520248 2290 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 FARSBP1-201ENST00000435808 1778 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 RNA5SP79-201ENST00000365193 109 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 U8.14-201ENST00000390843 143 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 HMGB3P1-201ENST00000393368 573 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 SNRPEP2-201ENST00000397592 279 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SKP129-201ENST00000410288 299 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 BX295541.1-201ENST00000417774 250 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 HMGB3P20-201ENST00000417997 600 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AL161742.1-201ENST00000418154 584 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 MTND2P23-201ENST00000422990 651 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AL035410.1-201ENST00000427409 427 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AF274573.1-201ENST00000430535 494 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 SALL1P1-201ENST00000438101 3837 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AL137074.1-201ENST00000442640 465 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 RN7SL861P-201ENST00000473793 285 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 TRBV8-2-201ENST00000475637 270 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 ZNF721-203ENST00000506646 935 ntTSL 2 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC010493.1-201ENST00000513479 292 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 snoU109.5-201ENST00000516231 132 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 COX4I1P1-201ENST00000554239 509 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AL390334.1-201ENST00000556395 450 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 TRAV15-201ENST00000556680 249 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 OR7E94P-202ENST00000601375 790 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 RPS28P1-201ENST00000604589 187 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC104010.1-201ENST00000616889 150 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC234782.5-201ENST00000617723 324 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC243756.2-201ENST00000618406 463 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 PSMC1P7-201ENST00000495689 1315 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 Z99129.4-201ENST00000624649 2435 ntBASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 GJA1-201ENST00000282561 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 OR6J1-201ENST00000540461 4165 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
PCDHB11Q9Y5F2 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms