Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CLIP4-204ENST00000404424 2480 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 TOPORS-201ENST00000360538 4098 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 DRD1-201ENST00000393752 4054 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ATP1A3-209ENST00000602133 3458 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 STK26-201ENST00000354719 3179 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 MST1L-202ENST00000455405 3184 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 FAM196A-203ENST00000614311 4335 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ENDOU-202ENST00000422538 2413 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ABCF1-202ENST00000376545 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 HAMP-201ENST00000222304 558 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 KRTAP4-8-201ENST00000318329 468 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 KLK8-203ENST00000347619 555 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 DHPS-202ENST00000351660 1090 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 RNU1-72P-201ENST00000362976 153 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 GSTM5-202ENST00000369812 657 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 IGLV1-50-201ENST00000390291 405 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 SNORA48.5-201ENST00000391143 135 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 MAPK12-202ENST00000395778 605 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 SNORA36B-201ENST00000410438 131 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 MRPS21P6-201ENST00000415184 261 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 OR2AM1P-201ENST00000422137 422 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC253536.2-201ENST00000423307 254 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 SLC25A5P5-201ENST00000435239 897 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC016894.1-201ENST00000444364 311 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AL358232.1-201ENST00000448030 501 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 FTLP18-201ENST00000453860 523 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 RPL26P9-201ENST00000457466 433 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 RN7SL520P-201ENST00000474110 286 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC008021.1-201ENST00000474180 414 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 RN7SL278P-201ENST00000488843 296 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC010307.2-202ENST00000502776 570 ntTSL 4 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 MIR3945HG-201ENST00000510284 576 ntTSL 4 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC011431.1-201ENST00000512971 230 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AL732372.3-201ENST00000514436 1239 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC106782.3-201ENST00000563429 258 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC116348.3-201ENST00000569459 699 ntTSL 3 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 MIR5001-201ENST00000580185 100 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 SH3GL1P2-201ENST00000582245 1082 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 RN7SL478P-201ENST00000584358 298 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 MIR8083-201ENST00000620823 89 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 Six3os1_7.1-201ENST00000621512 201 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ZNF646P1-201ENST00000621811 995 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 BTN2A1-207ENST00000541522 2845 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CSDE1-217ENST00000534699 2667 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 EIF3CL-202ENST00000398944 3053 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 PASK-202ENST00000358649 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 SIPA1L2-202ENST00000308942 2937 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ATP13A1-201ENST00000291503 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ARHGAP30-203ENST00000368016 3482 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 BTN3A1-203ENST00000414912 2077 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 LIPH-202ENST00000424591 2065 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC090987.1-201ENST00000523502 2072 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AL035696.3-201ENST00000580119 2050 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 RPS6KA2-206ENST00000503859 4137 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ARNT2-201ENST00000303329 6558 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 OR51S1-201ENST00000322101 1750 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CPB1-208ENST00000491148 1773 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 EPB41L1-218ENST00000628415 3287 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 NLRX1-203ENST00000409265 3665 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 HSP90AB1-203ENST00000371646 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 BAGE2-203ENST00000496773 2598 ntBASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 NAA11-201ENST00000286794 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 AC004893.2-201ENST00000360902 3398 ntTSL 2 BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
KRTAP3-3Q9BYR6 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms