Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC090236.2-201ENST00000587933 1101 ntBASIC4.6□□□□□ -1.67
CD74P04233 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.6□□□□□ -1.67
CD74P04233 AC073593.1-201ENST00000624500 411 ntBASIC4.6□□□□□ -1.67
CD74P04233 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.6□□□□□ -1.67
CD74P04233 AL357140.4-201ENST00000636827 412 ntBASIC4.6□□□□□ -1.67
CD74P04233 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.6□□□□□ -1.67
CD74P04233 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.6□□□□□ -1.67
CD74P04233 CASC19-274ENST00000642018 970 ntBASIC4.6□□□□□ -1.67
CD74P04233 ZNF652P1-201ENST00000442420 1309 ntBASIC4.6□□□□□ -1.67
CD74P04233 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.6□□□□□ -1.67
CD74P04233 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 CR382285.2-201ENST00000624662 1495 ntBASIC4.6□□□□□ -1.67
CD74P04233 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.6□□□□□ -1.67
CD74P04233 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
CD74P04233 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CD74P04233 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.6□□□□□ -1.67
CD74P04233 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.6□□□□□ -1.67
CD74P04233 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.6□□□□□ -1.67
CD74P04233 AC004817.4-201ENST00000602396 3625 ntBASIC4.6□□□□□ -1.67
CD74P04233 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.6□□□□□ -1.67
CD74P04233 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.6□□□□□ -1.67
CD74P04233 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.6□□□□□ -1.67
CD74P04233 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CD74P04233 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
CD74P04233 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.59□□□□□ -1.67
CD74P04233 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CD74P04233 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 RNU1-19P-201ENST00000363306 165 ntBASIC4.59□□□□□ -1.67
CD74P04233 RNA5SP232-201ENST00000364144 119 ntBASIC4.59□□□□□ -1.67
CD74P04233 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 RN7SKP286-201ENST00000410894 299 ntBASIC4.59□□□□□ -1.67
CD74P04233 SETP15-201ENST00000412724 337 ntBASIC4.59□□□□□ -1.67
CD74P04233 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 HSPD1P9-201ENST00000420325 1636 ntBASIC4.59□□□□□ -1.67
CD74P04233 PTP4A1P1-201ENST00000420539 515 ntBASIC4.59□□□□□ -1.67
CD74P04233 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.59□□□□□ -1.67
CD74P04233 AL139158.1-201ENST00000424719 340 ntBASIC4.59□□□□□ -1.67
CD74P04233 MTND6P12-201ENST00000428247 522 ntBASIC4.59□□□□□ -1.67
CD74P04233 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.59□□□□□ -1.67
CD74P04233 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
CD74P04233 AC090018.1-201ENST00000434369 367 ntBASIC4.59□□□□□ -1.67
CD74P04233 AC046176.1-201ENST00000435260 1170 ntBASIC4.59□□□□□ -1.67
CD74P04233 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.59□□□□□ -1.67
CD74P04233 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 AC093166.3-201ENST00000448785 303 ntBASIC4.59□□□□□ -1.67
CD74P04233 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.59□□□□□ -1.67
CD74P04233 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 CFL1P4-201ENST00000451536 498 ntBASIC4.59□□□□□ -1.67
CD74P04233 RNA5SP103-201ENST00000459503 118 ntBASIC4.59□□□□□ -1.67
CD74P04233 RPSAP37-201ENST00000470913 821 ntBASIC4.59□□□□□ -1.67
CD74P04233 RPS3AP15-201ENST00000483874 781 ntBASIC4.59□□□□□ -1.67
CD74P04233 RN7SL170P-201ENST00000487098 295 ntBASIC4.59□□□□□ -1.67
CD74P04233 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 AC106822.1-201ENST00000502647 526 ntBASIC4.59□□□□□ -1.67
CD74P04233 KATNBL1P4-201ENST00000503545 918 ntBASIC4.59□□□□□ -1.67
CD74P04233 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.59□□□□□ -1.67
CD74P04233 SCARNA18.1-201ENST00000516330 83 ntBASIC4.59□□□□□ -1.67
CD74P04233 AC022360.1-201ENST00000521058 340 ntBASIC4.59□□□□□ -1.67
CD74P04233 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.59□□□□□ -1.67
CD74P04233 CASP5-209ENST00000531367 879 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 OR8G3P-201ENST00000533406 921 ntBASIC4.59□□□□□ -1.67
CD74P04233 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.59□□□□□ -1.67
CD74P04233 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.59□□□□□ -1.67
CD74P04233 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.59□□□□□ -1.67
CD74P04233 RPA2P1-201ENST00000556557 721 ntBASIC4.59□□□□□ -1.67
CD74P04233 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.59□□□□□ -1.67
CD74P04233 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CD74P04233 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.59□□□□□ -1.67
CD74P04233 AL390726.5-202ENST00000564800 256 ntBASIC4.59□□□□□ -1.67
CD74P04233 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.59□□□□□ -1.67
CD74P04233 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.59□□□□□ -1.67
CD74P04233 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 AC004801.6-201ENST00000616571 978 ntBASIC4.59□□□□□ -1.67
CD74P04233 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.59□□□□□ -1.67
CD74P04233 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms