Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 SLC2A14-215ENST00000542546 3120 ntTSL 5 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
LHX6Q9UPM6 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC016582.1-201ENST00000592640 1716 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC093775.1-201ENST00000624154 1868 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 IARS2P1-201ENST00000508226 3173 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 TRHR-202ENST00000518632 1660 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 LNX1-201ENST00000263925 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 LINC01142-201ENST00000440404 1457 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 OSBPL9P1-201ENST00000604744 1469 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 ELK3-201ENST00000228741 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 PPP1R14D-201ENST00000299174 757 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 RNU6-823P-201ENST00000391042 103 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 RPS27-202ENST00000392558 625 ntTSL 2 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 PPP1R14D-202ENST00000427255 747 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC018804.1-201ENST00000430381 618 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 OR4A47-201ENST00000446524 1064 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 SLC25A15P2-201ENST00000457292 338 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 RPL7P51-201ENST00000490532 749 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 TRBVA-201ENST00000498804 316 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 RNU6-1004P-201ENST00000516584 111 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 IGHVII-51-2-201ENST00000519778 259 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC008562.1-201ENST00000521763 330 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC093249.3-201ENST00000562444 424 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC099684.3-201ENST00000574483 560 ntTSL 4 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 MIR3118-1-201ENST00000581787 76 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 RPL35AP25-201ENST00000584631 330 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AP001029.3-201ENST00000588063 596 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC018690.1-201ENST00000608144 626 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 MIR7515HG-257ENST00000625915 852 ntTSL 5 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 AC247036.7-201ENST00000639643 304 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 HLA-B-258ENST00000640615 240 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 PEG10-206ENST00000612941 6392 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 PEG10-209ENST00000617526 6392 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 XRCC6P4-201ENST00000518193 2067 ntBASIC8.09□□□□□ -1.11
LHX6Q9UPM6 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
LHX6Q9UPM6 CHRM2-202ENST00000401861 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
LHX6Q9UPM6 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.09□□□□□ -1.12
LHX6Q9UPM6 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 AP001157.1-201ENST00000550837 2339 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 IQCH-AS1-203ENST00000559298 5753 ntTSL 5 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 OR2G2-201ENST00000320065 954 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 RNU6-450P-201ENST00000364654 107 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 RNU1-115P-201ENST00000365329 160 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 MIR1302-6-201ENST00000408466 90 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 RN7SKP117-201ENST00000410175 264 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 CHIAP3-201ENST00000423668 1133 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 AP001062.2-201ENST00000426029 127 ntTSL 3 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 RPSAP40-201ENST00000442343 891 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 MED28P3-201ENST00000444288 531 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 MORF4-201ENST00000447135 971 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 AC073476.1-201ENST00000452854 407 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 RN7SL791P-201ENST00000467868 295 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 AC108688.1-201ENST00000485817 713 ntBASIC8.08□□□□□ -1.12
LHX6Q9UPM6 AC021491.1-201ENST00000502300 349 ntTSL 5 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.08□□□□□ -1.12
LHX6Q9UPM6 PABPC1P1-201ENST00000506347 591 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms