Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 MIR6823-201ENST00000622118 61 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC089999.3-201ENST00000622440 577 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC073862.4-201ENST00000622982 854 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AC068620.4-201ENST00000636730 1182 ntBASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM39Q9HCM9 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC025809.2-201ENST00000625085 1802 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 UGT2B27P-201ENST00000505092 1620 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 RNA5SP485-201ENST00000365053 119 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 TCEA1P4-201ENST00000415066 844 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 MORF4L1P6-201ENST00000418771 268 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC083862.1-201ENST00000427378 1242 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 FTH1P16-201ENST00000435241 552 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 UBE2D3P1-201ENST00000436669 444 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC016908.1-201ENST00000442571 1219 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 ANKRD26P4-201ENST00000455755 950 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC092349.1-201ENST00000504903 310 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC018645.1-201ENST00000505003 109 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 SNORA58-201ENST00000505219 137 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AP003461.1-201ENST00000528866 78 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AP000662.1-201ENST00000530952 487 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC110760.3-201ENST00000598794 467 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC011891.2-201ENST00000604949 397 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AL360219.1-201ENST00000610230 366 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC105749.1-201ENST00000631338 2008 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 BX005019.1-201ENST00000561881 1810 ntBASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM39Q9HCM9 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms