Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 AL031123.3-201ENST00000623345 1837 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 RPL11P3-201ENST00000395256 523 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 RNA5SP251-201ENST00000410614 137 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 AC009480.2-201ENST00000422916 432 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 AC004975.1-201ENST00000428733 208 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 BX323845.1-201ENST00000432417 179 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 OR7E125P-201ENST00000443450 846 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
TOPBP1Q92547 AC007537.2-201ENST00000472093 511 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 IGKV2D-10-201ENST00000520194 281 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 OR4A17P-201ENST00000526032 904 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 OR4A43P-201ENST00000532938 908 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC8.75□□□□□ -1.01
TOPBP1Q92547 AC103792.1-201ENST00000603591 919 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 AL590392.1-201ENST00000604960 446 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 AL445423.1-201ENST00000609941 536 ntBASIC8.75□□□□□ -1.01
TOPBP1Q92547 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC8.74□□□□□ -1.01
TOPBP1Q92547 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
TOPBP1Q92547 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TOPBP1Q92547 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.74□□□□□ -1.01
TOPBP1Q92547 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TOPBP1Q92547 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.74□□□□□ -1.01
TOPBP1Q92547 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
TOPBP1Q92547 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
TOPBP1Q92547 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TOPBP1Q92547 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC8.74□□□□□ -1.01
TOPBP1Q92547 SNORA66-201ENST00000384792 133 ntBASIC8.74□□□□□ -1.01
TOPBP1Q92547 AL354714.3-201ENST00000447284 493 ntBASIC8.74□□□□□ -1.01
TOPBP1Q92547 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC8.74□□□□□ -1.01
TOPBP1Q92547 MIR4675-201ENST00000577898 77 ntBASIC8.74□□□□□ -1.01
TOPBP1Q92547 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
TOPBP1Q92547 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
TOPBP1Q92547 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 TTC3P1-201ENST00000399586 6081 ntBASIC8.73□□□□□ -1.01
TOPBP1Q92547 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.73□□□□□ -1.01
TOPBP1Q92547 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 AC091046.3-201ENST00000631455 1574 ntBASIC8.73□□□□□ -1.01
TOPBP1Q92547 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC8.73□□□□□ -1.01
TOPBP1Q92547 GLUD1P3-202ENST00000508551 200 ntBASIC8.73□□□□□ -1.01
TOPBP1Q92547 AC091912.1-201ENST00000511351 248 ntBASIC8.73□□□□□ -1.01
TOPBP1Q92547 AC006427.1-201ENST00000514359 712 ntBASIC8.73□□□□□ -1.01
TOPBP1Q92547 SCARNA20.4-201ENST00000516969 131 ntBASIC8.73□□□□□ -1.01
TOPBP1Q92547 GMFG-202ENST00000594700 397 ntTSL 2 BASIC8.73□□□□□ -1.01
TOPBP1Q92547 AP003400.3-201ENST00000624904 346 ntBASIC8.73□□□□□ -1.01
TOPBP1Q92547 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC8.73□□□□□ -1.01
TOPBP1Q92547 LPP-208ENST00000448637 5835 ntTSL 5 BASIC8.73□□□□□ -1.01
TOPBP1Q92547 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
TOPBP1Q92547 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
TOPBP1Q92547 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC8.73□□□□□ -1.01
TOPBP1Q92547 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 UGT2B24P-201ENST00000514441 1597 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TOPBP1Q92547 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
TOPBP1Q92547 ELOCP19-201ENST00000411919 318 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 ATP5A1P7-201ENST00000453978 1279 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 RPL17P2-201ENST00000491913 451 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 MORF4L1P3-201ENST00000525966 950 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 AC009643.1-201ENST00000532030 391 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 MIR3160-1-201ENST00000577972 85 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 AL353729.2-201ENST00000605859 1249 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 AL359757.1-201ENST00000623176 255 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 AC068724.3-201ENST00000625906 87 ntBASIC8.72□□□□□ -1.01
TOPBP1Q92547 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
TOPBP1Q92547 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.72□□□□□ -1.01
TOPBP1Q92547 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms