| MUC3A | Q02505 | TACC2-229 | ENST00000515603 | 9101 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | NNT-AS1-204 | ENST00000513560 | 4769 nt | TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | FAM71F2-205 | ENST00000641605 | 5749 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | LUZP1-203 | ENST00000418342 | 8421 nt | APPRIS P1 TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | DEFB136-201 | ENST00000382209 | 237 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC087380.1-202 | ENST00000415970 | 1163 nt | TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | RPS29P17-201 | ENST00000430795 | 166 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | LINC00415-201 | ENST00000439079 | 435 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AP000470.1-201 | ENST00000448063 | 693 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC007016.1-201 | ENST00000512110 | 244 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AF117829.1-202 | ENST00000524166 | 836 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | RGS5-218 | ENST00000526176 | 574 nt | TSL 4 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC090592.1-202 | ENST00000533049 | 568 nt | TSL 4 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC006441.1-201 | ENST00000581083 | 437 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC020978.9-201 | ENST00000624380 | 1141 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | ZNF107-206 | ENST00000620827 | 5685 nt | APPRIS P4 TSL 4 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | OR2J3-202 | ENST00000641151 | 3297 nt | APPRIS P1 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | STX3-208 | ENST00000641815 | 3236 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | PCYT1A-201 | ENST00000292823 | 5597 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | RPS4Y1-201 | ENST00000250784 | 1305 nt | APPRIS P1 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | TXNRD1-203 | ENST00000397736 | 3832 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | TMCO1-208 | ENST00000612311 | 4468 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | LGALS8-219 | ENST00000526589 | 6420 nt | APPRIS P4 TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | CSDE1-218 | ENST00000610726 | 4312 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | LINC01619-207 | ENST00000551843 | 2205 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC020912.1-201 | ENST00000638312 | 5059 nt | TSL 5 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC016251.2-201 | ENST00000623393 | 3089 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | TAAR1-201 | ENST00000275216 | 1020 nt | APPRIS P1 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | TCEAL7-202 | ENST00000372666 | 852 nt | APPRIS P1 TSL 2 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | PTMAP2-201 | ENST00000397627 | 327 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | RPL23AP59-201 | ENST00000399415 | 461 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | RPL7AP25-201 | ENST00000423357 | 805 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | HMGB3P5-201 | ENST00000428894 | 612 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AL117339.2-201 | ENST00000430475 | 180 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AL050321.1-201 | ENST00000432363 | 400 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | PRELID3BP6-201 | ENST00000503839 | 571 nt | BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | OR52Z1-201 | ENST00000510471 | 897 nt | APPRIS P1 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC092078.1-201 | ENST00000558370 | 325 nt | TSL 3 BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | IL31RA-204 | ENST00000396834 | 2903 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | MED12-203 | ENST00000374102 | 6827 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | GIGYF2-203 | ENST00000409451 | 5937 nt | TSL 1 (best) BASIC | 5.05 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | LTBP1-207 | ENST00000418533 | 5164 nt | TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | GRIK2-205 | ENST00000369138 | 4921 nt | TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | TOGARAM1-201 | ENST00000361462 | 6375 nt | APPRIS P1 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | SEC16A-206 | ENST00000431893 | 6465 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | SRCAP-202 | ENST00000395059 | 9126 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | DIO2-210 | ENST00000557010 | 6367 nt | APPRIS P1 TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | GPRIN3-201 | ENST00000333209 | 6260 nt | APPRIS P1 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | SLC12A1-203 | ENST00000396577 | 4708 nt | APPRIS ALT1 TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | PCBP1-AS1-210 | ENST00000416395 | 2451 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC110597.3-202 | ENST00000583493 | 3289 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | UTY-202 | ENST00000331397 | 6529 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | PVALB-202 | ENST00000404171 | 422 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | SCP2-205 | ENST00000408941 | 1298 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC018644.1-201 | ENST00000429934 | 551 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | TCEA1P3-201 | ENST00000443005 | 880 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | EIF4A2P4-201 | ENST00000458691 | 1196 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC124242.1-202 | ENST00000499554 | 1052 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AP001318.3-202 | ENST00000528876 | 509 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC090403.1-202 | ENST00000582108 | 833 nt | TSL 3 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC007497.1-201 | ENST00000610421 | 561 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | SLC8A1-AS1-218 | ENST00000610721 | 956 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | UHRF1BP1-201 | ENST00000192788 | 9570 nt | APPRIS P2 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | LMO3-225 | ENST00000541295 | 3498 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | ZNF143-201 | ENST00000299606 | 2562 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | MAPK10-263 | ENST00000641052 | 4307 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | C17orf78-204 | ENST00000615133 | 1862 nt | APPRIS P3 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | SV2C-202 | ENST00000502798 | 11035 nt | APPRIS P1 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | PTPRG-AS1-204 | ENST00000474795 | 2661 nt | TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | PRPF8-201 | ENST00000304992 | 7295 nt | APPRIS P1 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | RPS26P8-201 | ENST00000393490 | 348 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC108751.4-201 | ENST00000462931 | 1001 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | TRBV5-2-201 | ENST00000489095 | 273 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | NMNAT1P1-201 | ENST00000554095 | 876 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | MIR132-201 | ENST00000591554 | 101 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC243829.4-202 | ENST00000610845 | 410 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | OR51G1-201 | ENST00000623849 | 966 nt | APPRIS P1 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AL049536.1-201 | ENST00000625043 | 744 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC007389.5-201 | ENST00000629214 | 744 nt | TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | REV3L-202 | ENST00000368802 | 10701 nt | APPRIS P1 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | UTY-210 | ENST00000538878 | 6574 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AL121594.3-201 | ENST00000557565 | 3857 nt | APPRIS P1 TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC006511.3-201 | ENST00000624929 | 1783 nt | BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | SEC31A-204 | ENST00000355196 | 4104 nt | APPRIS P4 TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | LMO3-202 | ENST00000320122 | 3759 nt | APPRIS P1 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | CDON-201 | ENST00000263577 | 4186 nt | APPRIS P3 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | TNXB-201 | ENST00000375244 | 13132 nt | APPRIS P1 TSL 5 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | WDCP-202 | ENST00000406895 | 3700 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | PTK2-201 | ENST00000340930 | 4414 nt | TSL 2 BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | MCM10-202 | ENST00000378714 | 4547 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | PCNT-201 | ENST00000359568 | 10560 nt | APPRIS P2 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | ATP8A2-204 | ENST00000381655 | 9575 nt | APPRIS P1 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | NOSTRIN-201 | ENST00000317647 | 2294 nt | APPRIS P1 TSL 1 (best) BASIC | 5.04 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | CASP12-207 | ENST00000447913 | 819 nt | TSL 1 (best) BASIC | 5.03 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC012400.1-201 | ENST00000518452 | 381 nt | BASIC | 5.03 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AC008555.3-201 | ENST00000603717 | 442 nt | TSL 3 BASIC | 5.03 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | ZNF189-201 | ENST00000259395 | 3115 nt | TSL 1 (best) BASIC | 5.03 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | AQP9-201 | ENST00000219919 | 3034 nt | APPRIS P1 TSL 1 (best) BASIC | 5.03 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | CNTN4-205 | ENST00000427331 | 4980 nt | APPRIS P1 TSL 5 BASIC | 5.03 | □□□□□ -1.6 | | |
| MUC3A | Q02505 | CAST-207 | ENST00000395813 | 4356 nt | APPRIS ALT2 TSL 5 BASIC | 5.03 | □□□□□ -1.6 | | |