Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FXYD1-201ENST00000351325 592 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 RNU5E-1-201ENST00000362477 120 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 RNU6-115P-201ENST00000364310 107 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 SNORA62.2-201ENST00000364672 152 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 SSX6-201ENST00000376932 562 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL591416.1-201ENST00000404015 867 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL603650.1-201ENST00000412680 240 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC244157.1-201ENST00000415642 163 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 CHEK2P3-201ENST00000416118 248 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 PPP1R8P1-201ENST00000452549 1044 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 CACYBPP2-201ENST00000453625 678 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 RNU7-152P-201ENST00000458982 64 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 RN7SL392P-201ENST00000473024 299 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 RN7SL702P-201ENST00000488394 292 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 RPSAP51-201ENST00000497462 645 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC114797.1-201ENST00000514003 728 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC022695.2-201ENST00000518042 768 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 IGLVI-70-201ENST00000523272 390 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 OR5M2P-201ENST00000529003 936 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 LINC00681-201ENST00000530150 504 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC016954.1-201ENST00000549976 745 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL163153.1-201ENST00000554223 283 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC008269.2-201ENST00000561915 1105 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC024085.1-201ENST00000604299 432 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC011891.2-201ENST00000604949 397 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 AL022345.1-201ENST00000607292 135 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 FP236315.1-201ENST00000623723 457 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 AC005753.1-201ENST00000623837 618 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 SH3D19-202ENST00000409252 4888 ntAPPRIS P3 TSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 LRIG3-202ENST00000379141 3667 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 DHFR2-201ENST00000314636 3927 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 TMEM75-201ENST00000624314 2165 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 GLULP5-201ENST00000547831 1390 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 IMPG1-204ENST00000611179 3324 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC007998.4-201ENST00000612496 2533 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 AC127502.2-201ENST00000602663 2351 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 PRKCQ-204ENST00000610727 3077 ntTSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 CNIH4-205ENST00000465271 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 ZNF85-202ENST00000328178 2296 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
USB1Q9BQ65 Y_RNA.46-201ENST00000362695 102 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 RNA5SP141-201ENST00000364543 120 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 RNU6-702P-201ENST00000364982 107 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 RNU6-831P-201ENST00000384548 107 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 MIR185-201ENST00000385288 82 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 MIR1302-3-201ENST00000408128 138 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.47□□□□□ -1.21
USB1Q9BQ65 RN7SKP181-201ENST00000411188 316 ntBASIC7.47□□□□□ -1.21
USB1Q9BQ65 VN2R10P-201ENST00000411871 853 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms