Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 NIPA2P5-201ENST00000452282 464 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 RPL7AP23-201ENST00000482625 776 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC113347.3-201ENST00000509113 148 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 UGT2A3P7-201ENST00000510485 734 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AADACP1-206ENST00000561502 1193 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AL135999.3-201ENST00000610501 812 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 CGA-206ENST00000630630 832 ntTSL 2 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RC3H1Q5TC82 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 SNORA70.3-201ENST00000365075 132 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 MRPS6P2-201ENST00000381143 370 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 RNY3P10-201ENST00000384764 102 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 MT-TL1-201ENST00000386347 75 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 OR4K6P-201ENST00000416478 897 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 RPL21P32-201ENST00000419877 477 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 MTCYBP24-201ENST00000420387 1106 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 CYCSP46-201ENST00000423569 204 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 OR8F1P-201ENST00000425243 930 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC115283.1-201ENST00000427353 400 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC073614.1-201ENST00000438690 650 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 MTND3P1-201ENST00000441336 220 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 SSXP1-201ENST00000453640 473 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AHI1-208ENST00000488690 712 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC023827.2-201ENST00000566880 1061 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC008752.3-201ENST00000588113 712 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC002550.2-201ENST00000621246 394 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 EED-206ENST00000527888 1422 ntTSL 2 BASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AP003486.1-201ENST00000525716 3994 ntBASIC8.63□□□□□ -1.03
RC3H1Q5TC82 AL132640.2-201ENST00000559968 1698 ntBASIC8.62□□□□□ -1.03
RC3H1Q5TC82 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
RC3H1Q5TC82 AL359715.3-201ENST00000569267 2123 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms