Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 LINC01060-204ENST00000510832 2435 ntTSL 2 BASIC10.32□□□□□ -0.76
CHGAP10645 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
CHGAP10645 RN7SKP191-201ENST00000364713 306 ntBASIC10.32□□□□□ -0.76
CHGAP10645 RNU6-1055P-201ENST00000391085 107 ntBASIC10.32□□□□□ -0.76
CHGAP10645 HMGB3P23-201ENST00000414981 585 ntBASIC10.32□□□□□ -0.76
CHGAP10645 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC10.32□□□□□ -0.76
CHGAP10645 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC10.32□□□□□ -0.76
CHGAP10645 FBP2P1-202ENST00000424473 530 ntBASIC10.32□□□□□ -0.76
CHGAP10645 FTH1P5-201ENST00000425761 545 ntBASIC10.32□□□□□ -0.76
CHGAP10645 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 AL138787.1-202ENST00000437804 898 ntBASIC10.32□□□□□ -0.76
CHGAP10645 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC10.32□□□□□ -0.76
CHGAP10645 AC244505.5-201ENST00000443639 207 ntBASIC10.32□□□□□ -0.76
CHGAP10645 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC10.32□□□□□ -0.76
CHGAP10645 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC10.32□□□□□ -0.76
CHGAP10645 PTMAP1-205ENST00000455552 325 ntBASIC10.32□□□□□ -0.76
CHGAP10645 SNRPFP4-201ENST00000456366 242 ntBASIC10.32□□□□□ -0.76
CHGAP10645 AC090013.1-201ENST00000485147 480 ntBASIC10.32□□□□□ -0.76
CHGAP10645 CPNE4-202ENST00000502818 2120 ntTSL 5 BASIC10.32□□□□□ -0.76
CHGAP10645 B3GNTL1P1-201ENST00000509174 289 ntBASIC10.32□□□□□ -0.76
CHGAP10645 PTGES3P3-201ENST00000511479 482 ntBASIC10.32□□□□□ -0.76
CHGAP10645 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
CHGAP10645 AC024589.1-201ENST00000512207 263 ntBASIC10.32□□□□□ -0.76
CHGAP10645 RNU6-358P-201ENST00000516564 75 ntBASIC10.32□□□□□ -0.76
CHGAP10645 RN7SKP11-201ENST00000517018 287 ntBASIC10.32□□□□□ -0.76
CHGAP10645 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC10.32□□□□□ -0.76
CHGAP10645 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC10.32□□□□□ -0.76
CHGAP10645 IGKV2D-38-201ENST00000518423 240 ntBASIC10.32□□□□□ -0.76
CHGAP10645 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 IGLVI-42-201ENST00000522485 381 ntBASIC10.32□□□□□ -0.76
CHGAP10645 NPIPB14P-203ENST00000532298 987 ntBASIC10.32□□□□□ -0.76
CHGAP10645 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC10.32□□□□□ -0.76
CHGAP10645 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC10.32□□□□□ -0.76
CHGAP10645 AC011447.2-201ENST00000592921 283 ntBASIC10.32□□□□□ -0.76
CHGAP10645 AC098614.4-201ENST00000607601 462 ntBASIC10.32□□□□□ -0.76
CHGAP10645 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
CHGAP10645 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC10.32□□□□□ -0.76
CHGAP10645 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC10.32□□□□□ -0.76
CHGAP10645 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
CHGAP10645 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
CHGAP10645 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
CHGAP10645 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CHGAP10645 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
CHGAP10645 EIF4BP4-201ENST00000441847 1780 ntBASIC10.31□□□□□ -0.76
CHGAP10645 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHGAP10645 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC10.31□□□□□ -0.76
CHGAP10645 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHGAP10645 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC10.31□□□□□ -0.76
CHGAP10645 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHGAP10645 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHGAP10645 THAP12P7-201ENST00000520248 2290 ntBASIC10.31□□□□□ -0.76
CHGAP10645 LRRC2-AS1-201ENST00000599511 2291 ntBASIC10.31□□□□□ -0.76
CHGAP10645 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
CHGAP10645 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHGAP10645 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHGAP10645 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHGAP10645 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CHGAP10645 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CHGAP10645 RN7SKP171-201ENST00000364417 303 ntBASIC10.31□□□□□ -0.76
CHGAP10645 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC10.31□□□□□ -0.76
CHGAP10645 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
CHGAP10645 SNORD94-201ENST00000386037 137 ntBASIC10.31□□□□□ -0.76
CHGAP10645 AC007066.1-201ENST00000392902 381 ntBASIC10.31□□□□□ -0.76
CHGAP10645 LL22NC01-81G9.3-201ENST00000400221 992 ntTSL 2 BASIC10.31□□□□□ -0.76
CHGAP10645 ALDH7A1P4-201ENST00000412255 178 ntBASIC10.31□□□□□ -0.76
CHGAP10645 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC10.31□□□□□ -0.76
CHGAP10645 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC10.31□□□□□ -0.76
CHGAP10645 AC092647.1-201ENST00000420654 287 ntBASIC10.31□□□□□ -0.76
CHGAP10645 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC10.31□□□□□ -0.76
CHGAP10645 HMGB1P45-201ENST00000435986 653 ntBASIC10.31□□□□□ -0.76
CHGAP10645 UBE2FP3-201ENST00000436366 524 ntBASIC10.31□□□□□ -0.76
CHGAP10645 AL353093.1-201ENST00000441292 436 ntBASIC10.31□□□□□ -0.76
CHGAP10645 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC10.31□□□□□ -0.76
CHGAP10645 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC10.31□□□□□ -0.76
CHGAP10645 RN7SL492P-201ENST00000460700 295 ntBASIC10.31□□□□□ -0.76
CHGAP10645 RPL29P23-201ENST00000486188 442 ntBASIC10.31□□□□□ -0.76
CHGAP10645 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC10.31□□□□□ -0.76
CHGAP10645 AC106872.4-201ENST00000510050 523 ntBASIC10.31□□□□□ -0.76
CHGAP10645 MINOS1P4-201ENST00000515470 318 ntBASIC10.31□□□□□ -0.76
CHGAP10645 PTTG3P-201ENST00000521862 606 ntBASIC10.31□□□□□ -0.76
CHGAP10645 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
CHGAP10645 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC10.31□□□□□ -0.76
CHGAP10645 AC023310.2-201ENST00000553844 547 ntBASIC10.31□□□□□ -0.76
CHGAP10645 AC015801.1-201ENST00000585651 153 ntBASIC10.31□□□□□ -0.76
CHGAP10645 MRPS5P4-201ENST00000592830 325 ntBASIC10.31□□□□□ -0.76
CHGAP10645 RPS4XP21-201ENST00000603814 750 ntBASIC10.31□□□□□ -0.76
CHGAP10645 AC008536.2-201ENST00000607284 349 ntBASIC10.31□□□□□ -0.76
CHGAP10645 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC10.31□□□□□ -0.76
CHGAP10645 MRPL57P3-201ENST00000619218 176 ntBASIC10.31□□□□□ -0.76
CHGAP10645 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms