Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 MESTP1-201ENST00000404287 994 ntBASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 FSCN1P1-201ENST00000568912 1481 ntBASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNX11Q9Y5W9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 AC104076.2-201ENST00000448912 469 ntBASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 AL445675.2-201ENST00000620291 557 ntBASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNX11Q9Y5W9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 AC073314.1-201ENST00000568729 2216 ntBASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 DUX4L26-201ENST00000489078 1255 ntBASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 AC010203.1-204ENST00000548782 407 ntBASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 FP700111.2-201ENST00000619190 1892 ntBASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 DPP3P2-201ENST00000416030 1696 ntBASIC19.43■□□□□ 0.7
SNX11Q9Y5W9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 AC007225.1-201ENST00000566331 1836 ntBASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 NTF6B-201ENST00000591913 560 ntBASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.42■□□□□ 0.7
SNX11Q9Y5W9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX11Q9Y5W9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms