Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC14.07□□□□□ -0.16
CHTOPQ9Y3Y2 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CHTOPQ9Y3Y2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHTOPQ9Y3Y2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CHTOPQ9Y3Y2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.07□□□□□ -0.16
CHTOPQ9Y3Y2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CHTOPQ9Y3Y2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CHTOPQ9Y3Y2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 TSPY13P-201ENST00000338964 914 ntBASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.05□□□□□ -0.16
CHTOPQ9Y3Y2 AC024909.3-201ENST00000611513 2257 ntBASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 AP005435.1-201ENST00000529293 1178 ntBASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 KRT125P-201ENST00000546827 989 ntBASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CHTOPQ9Y3Y2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms