Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 DUSP5P2-201ENST00000426873 1033 ntBASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 GUSBP6-202ENST00000438529 1198 ntBASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF11Q9Y3C5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 NCF1B-203ENST00000435988 1254 ntBASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RNF11Q9Y3C5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 AC093484.2-201ENST00000580996 2166 ntBASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF11Q9Y3C5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 SLC29A4P1-201ENST00000398760 971 ntBASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 TSPY6P-201ENST00000448518 926 ntBASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 AC092118.2-201ENST00000613495 667 ntBASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF11Q9Y3C5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms