Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
NOD1Q9Y239 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.66■■□□□ 1.06
NOD1Q9Y239 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NOD1Q9Y239 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NOD1Q9Y239 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.66■■□□□ 1.06
NOD1Q9Y239 FAM87A-204ENST00000613235 858 ntBASIC21.66■■□□□ 1.06
NOD1Q9Y239 AC116562.4-202ENST00000641738 218 ntBASIC21.66■■□□□ 1.06
NOD1Q9Y239 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NOD1Q9Y239 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.66■■□□□ 1.06
NOD1Q9Y239 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NOD1Q9Y239 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NOD1Q9Y239 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOD1Q9Y239 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOD1Q9Y239 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOD1Q9Y239 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOD1Q9Y239 INGX-201ENST00000359239 846 ntBASIC21.65■■□□□ 1.06
NOD1Q9Y239 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOD1Q9Y239 HMGA1P5-201ENST00000412453 271 ntBASIC21.65■■□□□ 1.06
NOD1Q9Y239 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOD1Q9Y239 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 CCR12P-201ENST00000446203 998 ntBASIC21.65■■□□□ 1.06
NOD1Q9Y239 FAM207BP-201ENST00000447172 505 ntBASIC21.65■■□□□ 1.06
NOD1Q9Y239 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOD1Q9Y239 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NOD1Q9Y239 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
NOD1Q9Y239 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NOD1Q9Y239 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NOD1Q9Y239 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NOD1Q9Y239 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.64■■□□□ 1.06
NOD1Q9Y239 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NOD1Q9Y239 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
NOD1Q9Y239 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
NOD1Q9Y239 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NOD1Q9Y239 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
NOD1Q9Y239 MFAP1P1-201ENST00000442257 1255 ntBASIC21.64■■□□□ 1.05
NOD1Q9Y239 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.64■■□□□ 1.05
NOD1Q9Y239 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.64■■□□□ 1.05
NOD1Q9Y239 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
NOD1Q9Y239 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
NOD1Q9Y239 HLA-A-209ENST00000638375 975 ntBASIC21.64■■□□□ 1.05
NOD1Q9Y239 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NOD1Q9Y239 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
NOD1Q9Y239 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NOD1Q9Y239 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
NOD1Q9Y239 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.63■■□□□ 1.05
NOD1Q9Y239 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NOD1Q9Y239 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NOD1Q9Y239 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NOD1Q9Y239 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NOD1Q9Y239 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.62■■□□□ 1.05
NOD1Q9Y239 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.62■■□□□ 1.05
NOD1Q9Y239 AC022616.7-201ENST00000525383 220 ntBASIC21.62■■□□□ 1.05
NOD1Q9Y239 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.62■■□□□ 1.05
NOD1Q9Y239 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NOD1Q9Y239 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NOD1Q9Y239 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NOD1Q9Y239 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NOD1Q9Y239 AC079834.2-201ENST00000609776 1949 ntBASIC21.62■■□□□ 1.05
NOD1Q9Y239 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NOD1Q9Y239 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NOD1Q9Y239 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NOD1Q9Y239 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NOD1Q9Y239 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NOD1Q9Y239 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.62■■□□□ 1.05
NOD1Q9Y239 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NOD1Q9Y239 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NOD1Q9Y239 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
NOD1Q9Y239 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NOD1Q9Y239 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.61■■□□□ 1.05
NOD1Q9Y239 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NOD1Q9Y239 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NOD1Q9Y239 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.61■■□□□ 1.05
NOD1Q9Y239 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.61■■□□□ 1.05
NOD1Q9Y239 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms