Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 AL023803.3-201ENST00000615559 522 ntBASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
CDK11AQ9UQ88 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 ISCU-203ENST00000431221 799 ntTSL 2 BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 NME1-207ENST00000480143 964 ntTSL 2 BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CDK11AQ9UQ88 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 STK25-234ENST00000535007 2459 ntTSL 2 BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 TSPY17P-201ENST00000450329 467 ntBASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 YBX1P2-201ENST00000489612 999 ntBASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CDK11AQ9UQ88 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CDK11AQ9UQ88 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
CDK11AQ9UQ88 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CDK11AQ9UQ88 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 MED25-212ENST00000618715 1467 ntTSL 5 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 TSPY5P-201ENST00000426936 936 ntBASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 COX11P1-201ENST00000489116 835 ntBASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 AL358472.4-201ENST00000633140 710 ntBASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
CDK11AQ9UQ88 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 SMG8-203ENST00000578922 2178 ntBASIC30.37■■■□□ 2.45
CDK11AQ9UQ88 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 AL031133.1-201ENST00000406807 723 ntBASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 GXYLT1P6-201ENST00000456472 1187 ntBASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 AL512604.3-201ENST00000569583 964 ntBASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC30.36■■■□□ 2.45
CDK11AQ9UQ88 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CDK11AQ9UQ88 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms