Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 AL355355.2-201ENST00000442321 338 ntBASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 AL445675.2-201ENST00000620291 557 ntBASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 CR392000.1-201ENST00000624770 1228 ntBASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 KRT16P1-201ENST00000399124 1418 ntBASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 KRT8P8-201ENST00000434750 1448 ntBASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
UBQLN1Q9UMX0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.08■□□□□ 0.97
UBQLN1Q9UMX0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.08■□□□□ 0.96
UBQLN1Q9UMX0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBQLN1Q9UMX0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
UBQLN1Q9UMX0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.08■□□□□ 0.96
UBQLN1Q9UMX0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 AP003071.4-201ENST00000562276 1284 ntBASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
UBQLN1Q9UMX0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 NUDT16P1-203ENST00000513809 620 ntBASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.06■□□□□ 0.96
UBQLN1Q9UMX0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
UBQLN1Q9UMX0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms