Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00474Q9P2X8 AC073314.1-201ENST00000568729 2216 ntBASIC12.77□□□□□ -0.36
LINC00474Q9P2X8 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00474Q9P2X8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LINC00474Q9P2X8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 OR2A1-AS1-207ENST00000486094 819 ntBASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00474Q9P2X8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 PNMA6B-201ENST00000538162 1200 ntBASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00474Q9P2X8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC00474Q9P2X8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC12.74□□□□□ -0.37
LINC00474Q9P2X8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00474Q9P2X8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
LINC00474Q9P2X8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
LINC00474Q9P2X8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms