Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 PHGDH-210ENST00000641115 1638 ntBASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KCNIP1Q9NZI2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KCNIP1Q9NZI2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 OR6D1P-202ENST00000641007 5290 ntBASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 AC093787.1-201ENST00000450396 207 ntBASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 AC133552.2-202ENST00000575694 574 ntBASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 AC080038.1-201ENST00000611274 1154 ntBASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
KCNIP1Q9NZI2 TREX1-205ENST00000625293 1783 ntBASIC16.46■□□□□ 0.22
KCNIP1Q9NZI2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
KCNIP1Q9NZI2 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
KCNIP1Q9NZI2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.46■□□□□ 0.22
KCNIP1Q9NZI2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 KRT17P1-201ENST00000399211 1546 ntBASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 AC004911.1-201ENST00000416316 871 ntBASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 AL137784.2-201ENST00000607332 1000 ntBASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
KCNIP1Q9NZI2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms