Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 AL049812.1-201ENST00000432563 2267 ntBASIC19.38■□□□□ 0.69
MKS1Q9NXB0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 AC079598.2-202ENST00000546624 1451 ntBASIC19.38■□□□□ 0.69
MKS1Q9NXB0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 AC093525.10-201ENST00000625130 1569 ntBASIC19.38■□□□□ 0.69
MKS1Q9NXB0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
MKS1Q9NXB0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 AL589743.5-201ENST00000616611 1050 ntBASIC19.37■□□□□ 0.69
MKS1Q9NXB0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MKS1Q9NXB0 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 DUX4L16-201ENST00000555130 1264 ntBASIC19.36■□□□□ 0.69
MKS1Q9NXB0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.36■□□□□ 0.69
MKS1Q9NXB0 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 CYP2T1P-201ENST00000432607 1285 ntBASIC19.35■□□□□ 0.69
MKS1Q9NXB0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
MKS1Q9NXB0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
MKS1Q9NXB0 AL031598.1-201ENST00000561511 1773 ntBASIC19.34■□□□□ 0.69
MKS1Q9NXB0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.34■□□□□ 0.69
MKS1Q9NXB0 ZNF815P-204ENST00000434898 1737 ntBASIC19.34■□□□□ 0.69
MKS1Q9NXB0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MKS1Q9NXB0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MKS1Q9NXB0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MKS1Q9NXB0 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MKS1Q9NXB0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
MKS1Q9NXB0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MKS1Q9NXB0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms