Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1R1Q9NWW0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.43■□□□□ 0.86
HCFC1R1Q9NWW0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 FAM207BP-201ENST00000447172 505 ntBASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 AC091390.4-202ENST00000476426 537 ntBASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.42■□□□□ 0.86
HCFC1R1Q9NWW0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 Z85996.1-201ENST00000494644 937 ntBASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HCFC1R1Q9NWW0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC1R1Q9NWW0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HCFC1R1Q9NWW0 LINC01465-201ENST00000408887 1940 ntBASIC20.39■□□□□ 0.86
HCFC1R1Q9NWW0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.39■□□□□ 0.86
HCFC1R1Q9NWW0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HCFC1R1Q9NWW0 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
HCFC1R1Q9NWW0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HCFC1R1Q9NWW0 KRT8P8-201ENST00000434750 1448 ntBASIC20.39■□□□□ 0.85
HCFC1R1Q9NWW0 AC096733.2-201ENST00000609937 1394 ntBASIC20.39■□□□□ 0.85
HCFC1R1Q9NWW0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HCFC1R1Q9NWW0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCFC1R1Q9NWW0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCFC1R1Q9NWW0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCFC1R1Q9NWW0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HCFC1R1Q9NWW0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.39■□□□□ 0.85
HCFC1R1Q9NWW0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms