Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BLOC1S4Q9NUP1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 POU5F1P3-201ENST00000428824 1078 ntBASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 AC073648.6-201ENST00000641589 218 ntBASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BLOC1S4Q9NUP1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 KRT18P16-201ENST00000510337 1294 ntBASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
BLOC1S4Q9NUP1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 AC006058.3-201ENST00000606217 1069 ntBASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 AC007952.6-201ENST00000573168 2673 ntBASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 AC003957.1-201ENST00000625108 2673 ntBASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
BLOC1S4Q9NUP1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 AC128676.1-201ENST00000454392 318 ntBASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
BLOC1S4Q9NUP1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
BLOC1S4Q9NUP1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
BLOC1S4Q9NUP1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
BLOC1S4Q9NUP1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.08
BLOC1S4Q9NUP1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
BLOC1S4Q9NUP1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
BLOC1S4Q9NUP1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
BLOC1S4Q9NUP1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.83■■□□□ 1.08
BLOC1S4Q9NUP1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
BLOC1S4Q9NUP1 TSPY20P-201ENST00000450910 630 ntBASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms