Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 TSPY26P-202ENST00000565928 3884 ntBASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CDC42SE1Q9NRR8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 PCDHA1-201ENST00000378133 2726 ntBASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
CDC42SE1Q9NRR8 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 CROCCP2-202ENST00000412962 2773 ntBASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 BID-213ENST00000615414 2236 ntTSL 5 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC10.1□□□□□ -0.79
CDC42SE1Q9NRR8 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms