Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.07■□□□□ 0.48
UBQLN4Q9NRR5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 ESRRAP1-201ENST00000400596 1257 ntBASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 RNF165-205ENST00000588679 2904 ntBASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.06■□□□□ 0.48
UBQLN4Q9NRR5 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 TREX1-205ENST00000625293 1783 ntBASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 PRKY-204ENST00000533551 1019 ntBASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.05■□□□□ 0.48
UBQLN4Q9NRR5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 YBX1P10-201ENST00000444752 975 ntBASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBQLN4Q9NRR5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 AL158211.5-201ENST00000623583 2518 ntBASIC18.03■□□□□ 0.48
UBQLN4Q9NRR5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms