Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMMDC1Q9NPL8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 AC007613.1-201ENST00000572811 2597 ntBASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 AL032819.2-201ENST00000624543 2162 ntBASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TIMMDC1Q9NPL8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 AL049812.1-201ENST00000432563 2267 ntBASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 AL512408.1-201ENST00000569378 2000 ntBASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 MIR4651-201ENST00000582622 73 ntBASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 TMEM191A-211ENST00000637163 1067 ntBASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TIMMDC1Q9NPL8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.79■□□□□ 0.6
TIMMDC1Q9NPL8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 AC105020.6-201ENST00000621523 1217 ntBASIC18.78■□□□□ 0.6
TIMMDC1Q9NPL8 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms