Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC4Q9HBW1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRRC4Q9HBW1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.72■□□□□ 0.91
LRRC4Q9HBW1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
LRRC4Q9HBW1 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 YBX1P10-201ENST00000444752 975 ntBASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRRC4Q9HBW1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.7■□□□□ 0.9
LRRC4Q9HBW1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 UBE2SP1-201ENST00000450587 669 ntBASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LRRC4Q9HBW1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.68■□□□□ 0.9
LRRC4Q9HBW1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LRRC4Q9HBW1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms