Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.77■□□□□ 0.6
BRF2Q9HAW0 AC090192.1-201ENST00000517740 490 ntBASIC18.77■□□□□ 0.6
BRF2Q9HAW0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 AC124283.5-201ENST00000624661 1809 ntBASIC18.77■□□□□ 0.59
BRF2Q9HAW0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 BX323043.1-201ENST00000641006 1765 ntBASIC18.76■□□□□ 0.59
BRF2Q9HAW0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC120498.8-201ENST00000614275 531 ntBASIC18.75■□□□□ 0.59
BRF2Q9HAW0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms