Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
BRF2Q9HAW0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.77■□□□□ 0.6
BRF2Q9HAW0 AC090192.1-201ENST00000517740 490 ntBASIC18.77■□□□□ 0.6
BRF2Q9HAW0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
BRF2Q9HAW0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
BRF2Q9HAW0 AC124283.5-201ENST00000624661 1809 ntBASIC18.77■□□□□ 0.59
BRF2Q9HAW0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
BRF2Q9HAW0 BX323043.1-201ENST00000641006 1765 ntBASIC18.76■□□□□ 0.59
BRF2Q9HAW0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC120498.8-201ENST00000614275 531 ntBASIC18.75■□□□□ 0.59
BRF2Q9HAW0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.75■□□□□ 0.59
BRF2Q9HAW0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.74■□□□□ 0.59
BRF2Q9HAW0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms