Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 AP006294.2-201ENST00000641667 209 ntBASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC113Q9H0I3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 AIRN-201ENST00000601203 4374 ntBASIC21.71■■□□□ 1.07
CCDC113Q9H0I3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.7■■□□□ 1.07
CCDC113Q9H0I3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.7■■□□□ 1.07
CCDC113Q9H0I3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CCDC113Q9H0I3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC113Q9H0I3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 Z99916.2-201ENST00000604037 246 ntBASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC113Q9H0I3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 AC099778.1-201ENST00000568593 1911 ntBASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC113Q9H0I3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC113Q9H0I3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC113Q9H0I3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC113Q9H0I3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms