Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 HLA-A-209ENST00000638375 975 ntBASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 AC093323.1-202ENST00000635031 2045 ntBASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRFN3Q9BTN0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 RNA5SP419-201ENST00000515908 135 ntBASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 TPSP2-201ENST00000561760 610 ntBASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 AC106730.1-201ENST00000566722 1090 ntBASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 AC064862.7-201ENST00000604520 867 ntBASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN3Q9BTN0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 HTR5BP-201ENST00000430851 1154 ntBASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 LINC00265-3P-201ENST00000447588 903 ntBASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 AL390719.2-201ENST00000606993 987 ntBASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 AL353801.3-201ENST00000609898 542 ntBASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN3Q9BTN0 KRT8P36-201ENST00000489121 1440 ntBASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 MIR940-201ENST00000401276 94 ntBASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.68■□□□□ 0.74
LRFN3Q9BTN0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.67■□□□□ 0.74
LRFN3Q9BTN0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms