Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV9Q99603 AL512625.2-201ENST00000417533 625 ntBASIC15.3■□□□□ 0.04
TRGV9Q99603 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV9Q99603 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV9Q99603 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV9Q99603 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.3■□□□□ 0.04
TRGV9Q99603 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.3■□□□□ 0.04
TRGV9Q99603 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRGV9Q99603 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.3■□□□□ 0.04
TRGV9Q99603 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV9Q99603 BID-214ENST00000617586 542 ntTSL 5 BASIC15.3■□□□□ 0.04
TRGV9Q99603 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV9Q99603 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.3■□□□□ 0.04
TRGV9Q99603 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.3■□□□□ 0.04
TRGV9Q99603 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV9Q99603 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV9Q99603 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 AC120498.9-201ENST00000339021 3867 ntBASIC15.29■□□□□ 0.04
TRGV9Q99603 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRGV9Q99603 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.29■□□□□ 0.04
TRGV9Q99603 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.29■□□□□ 0.04
TRGV9Q99603 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC15.29■□□□□ 0.04
TRGV9Q99603 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.29■□□□□ 0.04
TRGV9Q99603 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRGV9Q99603 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.29■□□□□ 0.04
TRGV9Q99603 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.29■□□□□ 0.04
TRGV9Q99603 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRGV9Q99603 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV9Q99603 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.29■□□□□ 0.04
TRGV9Q99603 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC15.29■□□□□ 0.04
TRGV9Q99603 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.29■□□□□ 0.04
TRGV9Q99603 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRGV9Q99603 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRGV9Q99603 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRGV9Q99603 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC15.28■□□□□ 0.04
TRGV9Q99603 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TRGV9Q99603 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRGV9Q99603 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV9Q99603 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRGV9Q99603 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRGV9Q99603 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.28■□□□□ 0.04
TRGV9Q99603 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV9Q99603 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV9Q99603 AC116351.2-201ENST00000606540 1585 ntBASIC15.28■□□□□ 0.04
TRGV9Q99603 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TRGV9Q99603 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.28■□□□□ 0.04
TRGV9Q99603 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRGV9Q99603 AC018553.1-201ENST00000616682 1458 ntBASIC15.27■□□□□ 0.04
TRGV9Q99603 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRGV9Q99603 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRGV9Q99603 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV9Q99603 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
TRGV9Q99603 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRGV9Q99603 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV9Q99603 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.27■□□□□ 0.04
TRGV9Q99603 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV9Q99603 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRGV9Q99603 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.27■□□□□ 0.04
TRGV9Q99603 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV9Q99603 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.27■□□□□ 0.04
TRGV9Q99603 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms