Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SORT1Q99523 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.14■□□□□ 0.65
SORT1Q99523 ZNRF2P3-201ENST00000424200 374 ntBASIC19.14■□□□□ 0.65
SORT1Q99523 AC023632.3-201ENST00000521633 145 ntBASIC19.14■□□□□ 0.65
SORT1Q99523 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SORT1Q99523 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.14■□□□□ 0.65
SORT1Q99523 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.14■□□□□ 0.65
SORT1Q99523 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.14■□□□□ 0.65
SORT1Q99523 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SORT1Q99523 NTF6G-201ENST00000591094 616 ntBASIC19.14■□□□□ 0.65
SORT1Q99523 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.14■□□□□ 0.65
SORT1Q99523 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.14■□□□□ 0.65
SORT1Q99523 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 AC141586.3-201ENST00000562166 1838 ntBASIC19.14■□□□□ 0.65
SORT1Q99523 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SORT1Q99523 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SORT1Q99523 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.14■□□□□ 0.65
SORT1Q99523 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.14■□□□□ 0.65
SORT1Q99523 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.13■□□□□ 0.65
SORT1Q99523 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SORT1Q99523 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SORT1Q99523 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SORT1Q99523 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SORT1Q99523 AC104581.1-202ENST00000635932 2618 ntBASIC19.13■□□□□ 0.65
SORT1Q99523 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
SORT1Q99523 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SORT1Q99523 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SORT1Q99523 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SORT1Q99523 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.13■□□□□ 0.65
SORT1Q99523 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.13■□□□□ 0.65
SORT1Q99523 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.13■□□□□ 0.65
SORT1Q99523 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.13■□□□□ 0.65
SORT1Q99523 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SORT1Q99523 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SORT1Q99523 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SORT1Q99523 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SORT1Q99523 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SORT1Q99523 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.13■□□□□ 0.65
SORT1Q99523 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SORT1Q99523 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SORT1Q99523 AC009113.1-201ENST00000570267 2443 ntBASIC19.12■□□□□ 0.65
SORT1Q99523 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
SORT1Q99523 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.12■□□□□ 0.65
SORT1Q99523 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SORT1Q99523 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SORT1Q99523 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.12■□□□□ 0.65
SORT1Q99523 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.12■□□□□ 0.65
SORT1Q99523 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.12■□□□□ 0.65
SORT1Q99523 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SORT1Q99523 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SORT1Q99523 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.12■□□□□ 0.65
SORT1Q99523 AL355472.2-201ENST00000422958 438 ntBASIC19.12■□□□□ 0.65
SORT1Q99523 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SORT1Q99523 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.12■□□□□ 0.65
SORT1Q99523 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.12■□□□□ 0.65
SORT1Q99523 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SORT1Q99523 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SORT1Q99523 AC005082.1-201ENST00000413042 2259 ntBASIC19.12■□□□□ 0.65
SORT1Q99523 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SORT1Q99523 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.11■□□□□ 0.65
SORT1Q99523 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SORT1Q99523 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.11■□□□□ 0.65
SORT1Q99523 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.11■□□□□ 0.65
SORT1Q99523 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.11■□□□□ 0.65
SORT1Q99523 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.11■□□□□ 0.65
SORT1Q99523 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.11■□□□□ 0.65
SORT1Q99523 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SORT1Q99523 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.11■□□□□ 0.65
SORT1Q99523 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SORT1Q99523 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.11■□□□□ 0.65
SORT1Q99523 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SORT1Q99523 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SORT1Q99523 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
SORT1Q99523 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SORT1Q99523 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SORT1Q99523 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SORT1Q99523 AC018553.1-201ENST00000616682 1458 ntBASIC19.1■□□□□ 0.65
SORT1Q99523 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SORT1Q99523 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.1■□□□□ 0.65
SORT1Q99523 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SORT1Q99523 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
SORT1Q99523 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms