Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 TSPY5P-201ENST00000426936 936 ntBASIC21.12■□□□□ 0.97
YME1L1Q96TA2 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 COX11P1-201ENST00000489116 835 ntBASIC21.12■□□□□ 0.97
YME1L1Q96TA2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
YME1L1Q96TA2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 AC010653.2-201ENST00000623505 997 ntBASIC21.11■□□□□ 0.97
YME1L1Q96TA2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
YME1L1Q96TA2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
YME1L1Q96TA2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 AC007663.1-201ENST00000438948 1240 ntBASIC21.09■□□□□ 0.97
YME1L1Q96TA2 KRT18P56-201ENST00000507275 550 ntBASIC21.09■□□□□ 0.97
YME1L1Q96TA2 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
YME1L1Q96TA2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
YME1L1Q96TA2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms