Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS33AQ96AX1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
VPS33AQ96AX1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS33AQ96AX1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS33AQ96AX1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
VPS33AQ96AX1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.83■□□□□ 0.61
VPS33AQ96AX1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
VPS33AQ96AX1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
VPS33AQ96AX1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 HCG11-201ENST00000411553 5696 ntBASIC18.83■□□□□ 0.6
VPS33AQ96AX1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
VPS33AQ96AX1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 AC100791.3-201ENST00000617619 330 ntBASIC18.82■□□□□ 0.6
VPS33AQ96AX1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.82■□□□□ 0.6
VPS33AQ96AX1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 KRT18P68-201ENST00000392293 1000 ntBASIC18.81■□□□□ 0.6
VPS33AQ96AX1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 MFSD11-216ENST00000590393 1141 ntBASIC18.81■□□□□ 0.6
VPS33AQ96AX1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.81■□□□□ 0.6
VPS33AQ96AX1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
VPS33AQ96AX1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms