Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SEMA6DQ8NFY4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 PHGDH-210ENST00000641115 1638 ntBASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.11■□□□□ 0.33
SEMA6DQ8NFY4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 AC116562.4-201ENST00000641316 2276 ntBASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 TREX1-205ENST00000625293 1783 ntBASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SEMA6DQ8NFY4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA6DQ8NFY4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA6DQ8NFY4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA6DQ8NFY4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.09■□□□□ 0.33
SEMA6DQ8NFY4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA6DQ8NFY4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.09■□□□□ 0.33
SEMA6DQ8NFY4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA6DQ8NFY4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SEMA6DQ8NFY4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SEMA6DQ8NFY4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms