Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BBS1Q8NFJ9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BBS1Q8NFJ9 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BBS1Q8NFJ9 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BBS1Q8NFJ9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
BBS1Q8NFJ9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.42
BBS1Q8NFJ9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 AC137761.2-201ENST00000561729 223 ntBASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 AC145350.3-201ENST00000569033 163 ntBASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BBS1Q8NFJ9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 HLA-G-202ENST00000376815 851 ntBASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 HLA-G-203ENST00000376818 1127 ntBASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 KRT18P11-201ENST00000435214 1283 ntBASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 AC034268.1-201ENST00000441047 882 ntBASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 DUX4L16-201ENST00000555130 1264 ntBASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 CYP2T3P-201ENST00000601990 817 ntBASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 AC011767.1-201ENST00000617410 1153 ntBASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BBS1Q8NFJ9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BBS1Q8NFJ9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 CYP2T1P-201ENST00000432607 1285 ntBASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.61■□□□□ 0.41
BBS1Q8NFJ9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms