Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 LETM1P2-201ENST00000597330 2178 ntBASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.24■□□□□ 0.35
DNAAF1Q8NEP3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DNAAF1Q8NEP3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 NEFHP1-201ENST00000412845 2629 ntBASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 AL032819.2-201ENST00000624543 2162 ntBASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 KRT18P5-201ENST00000436075 1291 ntBASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 RARRES2P4-201ENST00000514074 484 ntBASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 MFSD11-216ENST00000590393 1141 ntBASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 AC016405.3-201ENST00000607710 860 ntBASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 AC009237.14-201ENST00000609975 1594 ntBASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DNAAF1Q8NEP3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 MCRIP2P1-201ENST00000394346 511 ntBASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.21■□□□□ 0.35
DNAAF1Q8NEP3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms