Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 AC011298.3-201ENST00000615796 283 ntBASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC197Q8NCU1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 AL356740.2-201ENST00000601559 647 ntBASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC197Q8NCU1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 AL031598.1-201ENST00000561511 1773 ntBASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC197Q8NCU1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC197Q8NCU1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC197Q8NCU1 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms