Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC89Q8N998 AC004408.2-201ENST00000623613 2777 ntBASIC20.34■□□□□ 0.85
CCDC89Q8N998 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC89Q8N998 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC89Q8N998 AC023632.3-201ENST00000521633 145 ntBASIC20.34■□□□□ 0.85
CCDC89Q8N998 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC89Q8N998 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC89Q8N998 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC89Q8N998 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CCDC89Q8N998 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CCDC89Q8N998 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CCDC89Q8N998 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC89Q8N998 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CCDC89Q8N998 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC89Q8N998 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC89Q8N998 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC89Q8N998 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CCDC89Q8N998 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC89Q8N998 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC89Q8N998 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC89Q8N998 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CCDC89Q8N998 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC89Q8N998 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC89Q8N998 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC89Q8N998 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC89Q8N998 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC89Q8N998 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC89Q8N998 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC89Q8N998 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC89Q8N998 AC005181.1-201ENST00000604782 1256 ntBASIC20.33■□□□□ 0.85
CCDC89Q8N998 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.33■□□□□ 0.84
CCDC89Q8N998 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC89Q8N998 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CCDC89Q8N998 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CCDC89Q8N998 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC89Q8N998 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC89Q8N998 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC89Q8N998 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC89Q8N998 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC89Q8N998 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CCDC89Q8N998 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC89Q8N998 KRT17P1-201ENST00000399211 1546 ntBASIC20.32■□□□□ 0.84
CCDC89Q8N998 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 AL512625.2-201ENST00000417533 625 ntBASIC20.32■□□□□ 0.84
CCDC89Q8N998 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 AC093787.1-201ENST00000450396 207 ntBASIC20.32■□□□□ 0.84
CCDC89Q8N998 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC89Q8N998 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC89Q8N998 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC89Q8N998 HCG11-201ENST00000411553 5696 ntBASIC20.31■□□□□ 0.84
CCDC89Q8N998 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC89Q8N998 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC89Q8N998 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC89Q8N998 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC89Q8N998 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC89Q8N998 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC89Q8N998 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC89Q8N998 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC89Q8N998 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC89Q8N998 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms