Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX5Q8N196 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SIX5Q8N196 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX5Q8N196 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SIX5Q8N196 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.11■□□□□ 0.81
SIX5Q8N196 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX5Q8N196 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX5Q8N196 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX5Q8N196 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX5Q8N196 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX5Q8N196 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SIX5Q8N196 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIX5Q8N196 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX5Q8N196 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SIX5Q8N196 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX5Q8N196 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX5Q8N196 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX5Q8N196 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SIX5Q8N196 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.1■□□□□ 0.81
SIX5Q8N196 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.1■□□□□ 0.81
SIX5Q8N196 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX5Q8N196 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIX5Q8N196 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.1■□□□□ 0.81
SIX5Q8N196 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.1■□□□□ 0.81
SIX5Q8N196 AC007663.1-201ENST00000438948 1240 ntBASIC20.1■□□□□ 0.81
SIX5Q8N196 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.1■□□□□ 0.81
SIX5Q8N196 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.1■□□□□ 0.81
SIX5Q8N196 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.1■□□□□ 0.81
SIX5Q8N196 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIX5Q8N196 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.1■□□□□ 0.81
SIX5Q8N196 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.1■□□□□ 0.81
SIX5Q8N196 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.1■□□□□ 0.81
SIX5Q8N196 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX5Q8N196 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.1■□□□□ 0.81
SIX5Q8N196 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX5Q8N196 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SIX5Q8N196 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SIX5Q8N196 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SIX5Q8N196 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIX5Q8N196 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SIX5Q8N196 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.1■□□□□ 0.81
SIX5Q8N196 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SIX5Q8N196 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SIX5Q8N196 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX5Q8N196 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX5Q8N196 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX5Q8N196 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIX5Q8N196 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX5Q8N196 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 AC008040.2-201ENST00000461049 708 ntBASIC20.09■□□□□ 0.81
SIX5Q8N196 KRT18P16-201ENST00000510337 1294 ntBASIC20.09■□□□□ 0.81
SIX5Q8N196 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.09■□□□□ 0.81
SIX5Q8N196 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.09■□□□□ 0.81
SIX5Q8N196 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SIX5Q8N196 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.09■□□□□ 0.81
SIX5Q8N196 CLEC4GP1-201ENST00000596555 870 ntBASIC20.09■□□□□ 0.81
SIX5Q8N196 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
SIX5Q8N196 AC010653.2-201ENST00000623505 997 ntBASIC20.09■□□□□ 0.81
SIX5Q8N196 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.09■□□□□ 0.81
SIX5Q8N196 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SIX5Q8N196 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX5Q8N196 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.09■□□□□ 0.81
SIX5Q8N196 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
SIX5Q8N196 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.09■□□□□ 0.81
SIX5Q8N196 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIX5Q8N196 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SIX5Q8N196 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.08■□□□□ 0.81
SIX5Q8N196 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.08■□□□□ 0.81
SIX5Q8N196 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SIX5Q8N196 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIX5Q8N196 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIX5Q8N196 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIX5Q8N196 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SIX5Q8N196 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SIX5Q8N196 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SIX5Q8N196 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.08■□□□□ 0.81
SIX5Q8N196 AC004951.3-201ENST00000418645 1148 ntBASIC20.08■□□□□ 0.81
SIX5Q8N196 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SIX5Q8N196 HOMER2P1-201ENST00000455653 964 ntBASIC20.08■□□□□ 0.81
SIX5Q8N196 AL671277.2-201ENST00000458060 996 ntBASIC20.08■□□□□ 0.81
SIX5Q8N196 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.08■□□□□ 0.81
SIX5Q8N196 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.08■□□□□ 0.81
SIX5Q8N196 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SIX5Q8N196 AC096733.2-201ENST00000609937 1394 ntBASIC20.08■□□□□ 0.8
SIX5Q8N196 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SIX5Q8N196 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIX5Q8N196 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIX5Q8N196 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
SIX5Q8N196 AL359075.1-203ENST00000462729 1002 ntBASIC20.07■□□□□ 0.8
SIX5Q8N196 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SIX5Q8N196 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.07■□□□□ 0.8
SIX5Q8N196 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms