Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AP000692.2-201ENST00000608391 879 ntBASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 AC011298.2-201ENST00000617989 482 ntBASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 RCC2P6-201ENST00000526625 1557 ntBASIC19.53■□□□□ 0.72
TMEFF1Q8IYR6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 HMGA1P5-201ENST00000412453 271 ntBASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 AC008040.2-201ENST00000461049 708 ntBASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 AC139887.4-201ENST00000607877 719 ntBASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMEFF1Q8IYR6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEFF1Q8IYR6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
TMEFF1Q8IYR6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TMEFF1Q8IYR6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TMEFF1Q8IYR6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 AC004951.3-201ENST00000418645 1148 ntBASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 MFAP1P1-201ENST00000442257 1255 ntBASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 AC091076.1-201ENST00000610741 619 ntBASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 AC116562.4-202ENST00000641738 218 ntBASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.5■□□□□ 0.71
TMEFF1Q8IYR6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TMEFF1Q8IYR6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TMEFF1Q8IYR6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms