Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PTBP1P-201ENST00000554374 1601 ntBASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 AL162430.1-201ENST00000480705 870 ntBASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
MRPL55Q7Z7F7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 AC125437.2-201ENST00000625180 2167 ntBASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
MRPL55Q7Z7F7 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 APTR-203ENST00000430801 583 ntTSL 5 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL55Q7Z7F7 AC009237.14-201ENST00000609975 1594 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms