Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 AC018553.1-201ENST00000616682 1458 ntBASIC18.07■□□□□ 0.48
ZNF550Q7Z398 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.07■□□□□ 0.48
ZNF550Q7Z398 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 ITM2C-210ENST00000620962 501 ntBASIC18.06■□□□□ 0.48
ZNF550Q7Z398 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF550Q7Z398 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 ESRRAP1-201ENST00000400596 1257 ntBASIC18.05■□□□□ 0.48
ZNF550Q7Z398 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ZNF550Q7Z398 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 HLA-B-256ENST00000639848 1089 ntBASIC18.04■□□□□ 0.48
ZNF550Q7Z398 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ZNF550Q7Z398 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 PRORSD1P-201ENST00000295112 541 ntBASIC18.03■□□□□ 0.48
ZNF550Q7Z398 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.03■□□□□ 0.48
ZNF550Q7Z398 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms