Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 KRT18P16-201ENST00000510337 1294 ntBASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR2Q6PJQ5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
FOXR2Q6PJQ5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXR2Q6PJQ5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXR2Q6PJQ5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 AC104771.1-201ENST00000603335 964 ntBASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
FOXR2Q6PJQ5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXR2Q6PJQ5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 LINC01465-201ENST00000408887 1940 ntBASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 AC141586.3-201ENST00000562166 1838 ntBASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 AC008687.6-201ENST00000596318 630 ntBASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
FOXR2Q6PJQ5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 AC098818.2-201ENST00000564925 2320 ntBASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 AC104417.2-201ENST00000562989 1793 ntBASIC21.36■■□□□ 1.01
FOXR2Q6PJQ5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR2Q6PJQ5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
FOXR2Q6PJQ5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.35■■□□□ 1.01
FOXR2Q6PJQ5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR2Q6PJQ5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
FOXR2Q6PJQ5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR2Q6PJQ5 TNXA-203ENST00000507684 2038 ntBASIC21.35■■□□□ 1.01
FOXR2Q6PJQ5 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR2Q6PJQ5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXR2Q6PJQ5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms