Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 TSPY7P-201ENST00000431358 1114 ntBASIC17.3■□□□□ 0.36
FREM1Q5H8C1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 CD177P1-201ENST00000606252 935 ntBASIC17.3■□□□□ 0.36
FREM1Q5H8C1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
FREM1Q5H8C1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 TMEM179-206ENST00000616017 1645 ntBASIC17.29■□□□□ 0.36
FREM1Q5H8C1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.29■□□□□ 0.36
FREM1Q5H8C1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 AF186192.3-201ENST00000583427 947 ntBASIC17.28■□□□□ 0.36
FREM1Q5H8C1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 KRT16P1-201ENST00000399124 1418 ntBASIC17.28■□□□□ 0.36
FREM1Q5H8C1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.28■□□□□ 0.36
FREM1Q5H8C1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 KRT8P8-201ENST00000434750 1448 ntBASIC17.27■□□□□ 0.36
FREM1Q5H8C1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 AC116562.2-201ENST00000507042 360 ntBASIC17.27■□□□□ 0.36
FREM1Q5H8C1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FREM1Q5H8C1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
FREM1Q5H8C1 HTR7P1-201ENST00000538670 1336 ntBASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms