Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 KRT16P6-202ENST00000425692 1426 ntBASIC17.5■□□□□ 0.39
CCDC58Q4VC31 KRT8P17-201ENST00000453110 1448 ntBASIC17.5■□□□□ 0.39
CCDC58Q4VC31 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 PTBP1P-201ENST00000554374 1601 ntBASIC17.5■□□□□ 0.39
CCDC58Q4VC31 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC58Q4VC31 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC58Q4VC31 AIRN-201ENST00000601203 4374 ntBASIC17.49■□□□□ 0.39
CCDC58Q4VC31 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 AL139246.5-201ENST00000606645 996 ntBASIC17.48■□□□□ 0.39
CCDC58Q4VC31 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC58Q4VC31 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC58Q4VC31 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms