Protein–RNA interactions for Protein: Q02742

GCNT1, Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCNT1Q02742 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GCNT1Q02742 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21■□□□□ 0.95
GCNT1Q02742 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
GCNT1Q02742 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GCNT1Q02742 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GCNT1Q02742 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
GCNT1Q02742 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21■□□□□ 0.95
GCNT1Q02742 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21■□□□□ 0.95
GCNT1Q02742 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21■□□□□ 0.95
GCNT1Q02742 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
GCNT1Q02742 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
GCNT1Q02742 AC093484.2-201ENST00000580996 2166 ntBASIC20.99■□□□□ 0.95
GCNT1Q02742 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GCNT1Q02742 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 KRT17P3-201ENST00000420566 1262 ntBASIC20.99■□□□□ 0.95
GCNT1Q02742 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.99■□□□□ 0.95
GCNT1Q02742 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.99■□□□□ 0.95
GCNT1Q02742 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.99■□□□□ 0.95
GCNT1Q02742 AC069544.1-201ENST00000609399 999 ntBASIC20.99■□□□□ 0.95
GCNT1Q02742 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.99■□□□□ 0.95
GCNT1Q02742 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
GCNT1Q02742 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
GCNT1Q02742 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
GCNT1Q02742 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.99■□□□□ 0.95
GCNT1Q02742 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
GCNT1Q02742 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GCNT1Q02742 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GCNT1Q02742 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GCNT1Q02742 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
GCNT1Q02742 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GCNT1Q02742 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
GCNT1Q02742 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.98■□□□□ 0.95
GCNT1Q02742 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GCNT1Q02742 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GCNT1Q02742 AC116562.4-201ENST00000641316 2276 ntBASIC20.98■□□□□ 0.95
GCNT1Q02742 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GCNT1Q02742 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
GCNT1Q02742 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GCNT1Q02742 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
GCNT1Q02742 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GCNT1Q02742 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.97■□□□□ 0.95
GCNT1Q02742 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.97■□□□□ 0.95
GCNT1Q02742 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
GCNT1Q02742 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
GCNT1Q02742 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.97■□□□□ 0.95
GCNT1Q02742 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
GCNT1Q02742 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.97■□□□□ 0.95
GCNT1Q02742 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.97■□□□□ 0.95
GCNT1Q02742 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 ESRRAP1-201ENST00000400596 1257 ntBASIC20.97■□□□□ 0.95
GCNT1Q02742 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.97■□□□□ 0.95
GCNT1Q02742 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.97■□□□□ 0.95
GCNT1Q02742 KRT18P16-201ENST00000510337 1294 ntBASIC20.97■□□□□ 0.95
GCNT1Q02742 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.97■□□□□ 0.95
GCNT1Q02742 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.97■□□□□ 0.95
GCNT1Q02742 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.97■□□□□ 0.95
GCNT1Q02742 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.97■□□□□ 0.95
GCNT1Q02742 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.97■□□□□ 0.95
GCNT1Q02742 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.97■□□□□ 0.95
GCNT1Q02742 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
GCNT1Q02742 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GCNT1Q02742 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GCNT1Q02742 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
GCNT1Q02742 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
GCNT1Q02742 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GCNT1Q02742 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.96■□□□□ 0.95
GCNT1Q02742 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.96■□□□□ 0.95
GCNT1Q02742 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GCNT1Q02742 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.96■□□□□ 0.95
GCNT1Q02742 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
GCNT1Q02742 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.96■□□□□ 0.95
GCNT1Q02742 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.96■□□□□ 0.95
GCNT1Q02742 CD99P1-205ENST00000527459 561 ntBASIC20.96■□□□□ 0.95
GCNT1Q02742 PRKY-204ENST00000533551 1019 ntBASIC20.96■□□□□ 0.95
GCNT1Q02742 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.96■□□□□ 0.95
GCNT1Q02742 MTDHP1-201ENST00000605323 784 ntBASIC20.96■□□□□ 0.95
GCNT1Q02742 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
GCNT1Q02742 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GCNT1Q02742 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.96■□□□□ 0.95
GCNT1Q02742 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GCNT1Q02742 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms