Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.88■□□□□ 0.29
UBA52P62987 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBA52P62987 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.87■□□□□ 0.29
UBA52P62987 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.87■□□□□ 0.29
UBA52P62987 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 DUSP5P2-201ENST00000426873 1033 ntBASIC16.87■□□□□ 0.29
UBA52P62987 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.87■□□□□ 0.29
UBA52P62987 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.87■□□□□ 0.29
UBA52P62987 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.87■□□□□ 0.29
UBA52P62987 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
UBA52P62987 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
UBA52P62987 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.87■□□□□ 0.29
UBA52P62987 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.87■□□□□ 0.29
UBA52P62987 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBA52P62987 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.87■□□□□ 0.29
UBA52P62987 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
UBA52P62987 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
UBA52P62987 AC098590.1-201ENST00000468126 897 ntBASIC16.86■□□□□ 0.29
UBA52P62987 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.86■□□□□ 0.29
UBA52P62987 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.86■□□□□ 0.29
UBA52P62987 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.86■□□□□ 0.29
UBA52P62987 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.86■□□□□ 0.29
UBA52P62987 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.86■□□□□ 0.29
UBA52P62987 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
UBA52P62987 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 AP006294.2-201ENST00000641667 209 ntBASIC16.86■□□□□ 0.29
UBA52P62987 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 AC125437.2-201ENST00000625180 2167 ntBASIC16.86■□□□□ 0.29
UBA52P62987 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
UBA52P62987 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.86■□□□□ 0.29
UBA52P62987 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.86■□□□□ 0.29
UBA52P62987 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
UBA52P62987 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
UBA52P62987 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBA52P62987 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
UBA52P62987 AC020916.1-201ENST00000587762 1774 ntBASIC16.85■□□□□ 0.29
UBA52P62987 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UBA52P62987 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBA52P62987 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.85■□□□□ 0.29
UBA52P62987 AC091874.3-201ENST00000512672 1195 ntBASIC16.85■□□□□ 0.29
UBA52P62987 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.85■□□□□ 0.29
UBA52P62987 AL162412.1-201ENST00000567129 965 ntBASIC16.85■□□□□ 0.29
UBA52P62987 AL591742.1-201ENST00000604433 565 ntBASIC16.85■□□□□ 0.29
UBA52P62987 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UBA52P62987 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
UBA52P62987 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBA52P62987 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.84■□□□□ 0.29
UBA52P62987 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
UBA52P62987 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.84■□□□□ 0.29
UBA52P62987 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.84■□□□□ 0.29
UBA52P62987 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
UBA52P62987 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.84■□□□□ 0.29
UBA52P62987 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.84■□□□□ 0.29
UBA52P62987 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
UBA52P62987 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.84■□□□□ 0.29
UBA52P62987 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
UBA52P62987 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 KRT16P2-201ENST00000414673 1423 ntBASIC16.84■□□□□ 0.29
UBA52P62987 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBA52P62987 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms